ARCHIVED CATALOG: Visit catalog.ucsb.edu to view the 2023-2024 General Catalog.

UC Santa Barbara General CatalogUniversity of California, Santa Barbara

Biological Engineering Program

Biological Engineering 
Bioengineering Bldg. 
Telephone (805) 893-4326
Admissions inquires email: info@biongineeing.ucsb.edu
General program inquires email: info@biongineeing.ucsb.edu
Website: bioengineering.ucsb.edu
Program Chair: Beth Pruitt


 

Some courses displayed may not be offered every year. For actual course offerings by quarter, please consult the Quarterly Class Search or GOLD (for current students). To see the historical record of when a particular course has been taught in the past, please visit the Course Enrollment Histories.

Biological Engineering
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Collapse Courses Upper DivisionĀ 
BIOE 101. Responsible Conduct of Research
(1) DENNIS CLEGG
The responsible conduct of research (RCR) is essential to good science. Examples of goals of RCR education and training are to: Develop, foster, and maintain a culture of integrity in science; discourage and prevent unethical conduct; empower researchers to hold themselves and others accountable to high ethical standards; increase knowledge of, and sensitivity to, ethical issues surrounding the conduct of research by researchers with diverse backgrounds; improve the ability to make responsible choices when faced with ethical dilemmas involving research; provide an appreciation for the range of accepted scientific practices for conducting research; inform scientists and research trainees about the regulations, policies, and statutes.
BIOE 120A. Molecular Bioengineering
(3) STAFF
Prerequisite: Chemistry 1B, Chemistry 1BL, Mathematics 6B, and Physics 3
Recommended Preparation: One or more undergraduate courses in biochemistry or cell biology similar to MCDB 108ABC or Chem 142ABC or MCDB 103, or consent of instructor.
Enrollment Comments: Concurrently offered with BIOE 220A. Quarters usually offered: Fall.
Introduces students to molecular components of biology with application of engineering principles for analysis. Topics include: molecular components of cells, DNA/RNA structure and function, protein structure/function/folding, gene and protein regulation, DNA replication, and experimental and computational research methods.
BIOE 120B. Cellular Bioengineering
(3) STAFF
Prerequisite: BIOE 120A, or ENGR 120A, or consent of Instructor
Enrollment Comments: Concurrently offered with BIOE 220B. Quarters usually offered: Winter.
Introduces students to structural components of cells with application of engineering principles for analysis. Topics include: biomembrane structure and function, membrane proteins, membrane transport, intracellular compartments, intracellular trafficking, chemotaxis, cell cycle, apoptosis, and stem cells.
Collapse Courses GraduateĀ 
BIOE 210. Biomolecular and Biochemical Methods
(4) PLAXCO, MUKHERJEE
Prerequisite: General biology, general chemistry, and differential equations
Recommended Preparation: Familiarity with general biology, general chemistry and differential equations
The goal of the course is to generate in our students an understanding of the logic behind the key tools used to characterize biomolecules and biosystems. Both the mechanisms by which these techniques work, and the rationale for why each would be employed (strengths, weaknesses, potential pitfalls).
BIOE 211. Quantitative Experiments
(3) STOWERS
Prerequisite: At least one undergraduate course in biochemistry/cell biology and differential equations, or consent of the instructor.
Recommended Preparation: At least one undergraduate course in biochemistry/cell biology and differential equations
Enrollment Comments: Concurrently offered with ENGR 220A. Quarters usually offered: Fall.
This course is built around experimental design, data analysis, and quantitative modeling of biological processes and phenomena. Topics including experimental design considerations and a priori assumptions, probability, dimensional reduction, hypothesis testing, statistical analysis, and quantitative modeling through ordinary and partial differential equations. Case studies of recent and classic research papers in Bioengineering are used to illustrate key course topics through class discussions.
BIOE 212. Great Experiments
(4) PRUITT, STREICHAN
Prerequisite: BIOE 210 and BIOE 211 or consent of instructor.
Recommended Preparation: BIOE 210, BIOE 211 or ENGR 220A or equivalent
Enrollment Comments: Quarters usually offered: Winter.
Introduces students to seminal experiments that introduced pioneering biological engineering methods and experimental analysis. Students learn the principles of sound experimental design to test a hypothesis, become familiar with techniques using bacterial and stem cell model systems, as well as imaging and analysis methods.
BIOE 220A. Molecular Bioengineering
(3) STAFF
Prerequisite: Chem 1B/2B, Math 6B, Physics 3
Recommended Preparation: One or more undergraduate classes in biology and/or biochemistry similar to MCDB 108ABC or Chem 142ABC or MCDB 103, ENGR 3 or similar
Enrollment Comments: Quarters usually offered: Fall. Designed for graduate students enrolled in the bioengineering emphasis.
Introduces students to molecular components of biology and application of engineering principles for their analysis. Topics include: molecular components of cells; DNA structure and function, including replication; gene regulation; protein structure, function, and folding; chemical kinetics; signal transduction and mathematical descriptions thereof; and mechanics of biomolecules and subcellular structures (membranes, cytoskeleton).
BIOE 220B. Cell and Tissue Bioengineering
(3) STAFF
Prerequisite: Engr 220A or consent of Instructor
Enrollment Comments: Concurrently offered with BIOE 120B. Quarters usually offered: Winter. Designed for graduate students enrolled in the optional bioengineering emphasis.
Introduces students to structural components of cells, tissues, and organ systems, and the application of engineering principles for analysis. Topics include: biomembrane structure, function, and transport; intracellular compartments and trafficking; cell proliferation and death; cell-cell communication; biomaterials and stem cells; quantitative physiology of major organ systems (transport, mechanics, and electrical signaling); and homeostasis.
BIOE 225. Current Topics in Bioengineering
(1) STAFF
Enrollment Comments: Designed for majors. Quarters usually offered: Winter, Spring, Fall.
Seminar series highlighting current topics and advances in bioengineering presented by UCSB faculty or visiting scientists providing context and motivation for bioengineering learning, introducing students to concepts outside of their primary research specialty, and promoting interdisciplinary thinking and research collaboration.
BIOE 230. Bioengineering Student Seminar
(1) STAFF
Enrollment Comments: Designed for majors. Quarters usually offered: Winter, Spring, Fall. Designed for graduate students with a bioengineering emphasis
Seminar series where students present their original thesis research and also review journal articles that critically analyze contemporary bioengineering research. Three quarters of BIOE 230 are required for the optional BioE graduate emphasis. Presentations are evaluated and feedback is provided.
BIOE 240. Haptics: Touch Perception, Interaction, and Engineering
(4) YON VISELL
Prerequisite: None.
Haptics lies at the intersection of robotics, human-computer interaction, and computational and human perception. The term "haptics" is often used to refer to science and engineering related to the sense of touch. This course introduces human haptics, including sensory specializations and touch perception. It reviews the engineering of electronic technologies for haptic (touch) feedback, emerging technologies, and the design of haptic systems for human-computer interaction, sensory substitution, virtual reality, augmented reality, and other emerging areas. The class involves a mix of readings, hands-on activities, lecture/discussion, and projects.
BIOE 596. Directed Research
(1-6) STAFF
Prerequisite: Must be a graduate student enrolled in the Biological Engineering PhD Program.
Experimental or theoretical research undertaken under the direction of a faculty member for graduate students who have not yet advanced to candidacy.